Repository for calibration, simulation, and validity assessment of a Hybrid Discrete-Continuum model of cancer growth with applications in 3D cancer cell cultures (paper).
The associated code can be found in the repository of HyMetaGrowth.
The data associated with this study can be found on the FigShare repository.
For information on the usage of the code have a look at the README file.
A presentation related to the numerical methods and their implementation in GPU code can be found here.
Details on the data processing and segmentation pipeline can be found here.
For any question feel free to contact me at: nikolaos.dimitriou [at] mail.mcgill.ca
If you intend to use this code or data in your publications, please cite:
N. M. Dimitriou, S. Flores-Torres, J. M. Kinsella and G. D. Mitsis, “Quantifying the Morphology and Mechanisms of Cancer Progression in 3D in-vitro environments: Integrating Experiments and Multiscale Models,” in IEEE Transactions on Biomedical Engineering, 2022, doi: 10.1109/TBME.2022.3216231.